FastQCFastQC Report
Wed 4 Sep 2024
FullLengthTestDataset.bam

Summary

[OK]Basic Statistics

MeasureValue
FilenameFullLengthTestDataset.bam
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences480000
Sequences flagged as poor quality0
Sequence length90
%GC56

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA42760.8908333333333334No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)